Research Object Crate for Quality assessment, amplicon classification and functional prediction

Workflow for quality assessment of paired reads and classification using NGTax 2.0 and functional annotation using picrust2.
In addition files are exported to their respective subfolders for easier data management in a later stage.

Steps: - Quality plots (FastQC) - NG-TAX 2 High-throughput Amplicon Analysis - PICRUSt 2 - Function prediction from marker gene sequences - Export module for ngtax

Author

Bart Nijsse, Jasper Koehorst

License

AFL-3.0

Contents