Research Object Crate for Longread 16S classification workflow

Workflow for quality assessment and taxonomic classification of amplicon long read sequences.
In addition files are exported to their respective subfolders for easier data management in a later stage.

Inputs are expected to be basecalled fastq files

**Steps:**
- NanoPlot read quality control, before and after filtering
- fastplong read quality and length filtering
- Emu abundance; species-level taxonomic abundance for full-length 16S read

Author

Bart Nijsse, Jasper Koehorst

License

Apache-2.0

Contents