Research Object Crate for BioimageAIpub - publish Bioimaging data to HuggingFace for AI processing

Original URL: https://workflowhub.eu/workflows/2034/ro_crate?version=1

# BioimageAIpub A Python library to publish Bioimaging datasets to HuggingFace in AI-ready fashion. ## Installation ``` git clone https://github.com/German-BioImaging/bioimageaipub/bioimageaipub.git cd bioimageaipub pip install -r requirements.txt ``` ## Usage BioimageAIpub is supplied as a Python library. See `demo/demo.ipynb` for a Python notebook demonstrating the usage. ## Citation ## Acknowledgments This project was supported by and is attributable to the German Cancer Research Center (DKFZ) the Helmholtz Metadata Collaboration (HMC), an incubator-platform of the Helmholtz Association within the framework of the Information and Data Science strategic initiative.

Author
Stefan Dvoretskii, Marco Nolden, Josh Moore, German Cancer Research Center (DKFZ), HMC Hub Health
License
Apache-2.0

Contents

Main Workflow Diagram: demo/diagram.jpg
Size: 102810 bytes
Main Workflow Description: cwl/bioimageaipub_workflow.cwl
Size: 1197 bytes